STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpg2Glutamate carboxypeptidase; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases. (395 aa)    
Predicted Functional Partners:
ACPL_3783
Inner membrane amino-acid ABC transporter permease protein yecS; ABC-type amino acid transport system, permease component.
       0.789
atrC-2
Polar amino acid transport system ATP-binding protein; ABC-type sugar transport systems, ATPase components.
  
    0.781
ACPL_3784
Membrane-bound lytic murein transglycosylase F; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
    0.626
ACPL_1688
Hypothetical protein.
 
     0.604
menC
O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).
 
   
 0.573
ACPL_2330
Hypothetical protein.
 
     0.554
ACPL_3780
Magnesium or manganese-dependent protein phosphatase; FOG: PAS/PAC domain.
       0.503
ACPL_2279
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.
  
     0.472
ACPL_3785
Transcriptional regulators.
       0.452
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
 
 0.422
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.