Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3796Hypothetical protein; Predicted ATPase. (211 aa)    
Predicted Functional Partners:
ACPL_5588
Hypothetical protein.
  
     0.731
ACPL_3795
GCN5-related N-acetyltransferase; Predicted acetyltransferase.
       0.718
ACPL_8145
HtpX-like probable protease; Zn-dependent protease with chaperone function.
  
     0.674
ACPL_1244
Zinc metalloprotease zmpB.
  
     0.649
ACPL_3810
Hypothetical protein.
  
   0.637
dnaK-3
Molecular chaperone.
  
 0.618
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.575
ACPL_7818
Hypothetical protein.
  
 
 0.557
cpa1
Predicted carboxypeptidase.
  
 
   0.555
ogt-2
UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase 110 kDa subunit; FOG: TPR repeat.
   
 0.546
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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