STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3814Platelet-activating factor acetylhydrolase 2, cytoplasmic; Predicted dienelactone hydrolase. (388 aa)    
Predicted Functional Partners:
ACPL_3815
Spermidine/putrescine import ATP-binding protein potA; ABC-type sugar transport systems, ATPase components.
       0.773
ACPL_3816
ABC-2 type transporter; ABC-type multidrug transport system, permease component.
       0.773
ACPL_3817
Two-component system, NarL family, sensor histidine kinase DesK; Signal transduction histidine kinase.
       0.727
ACPL_3818
Two-component system, NarL family, response regulator DesR; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
       0.727
ACPL_3484
Hypothetical protein.
  
     0.593
abfB-3
Arabinofuranosidase.
  
     0.500
ACPL_3212
Hypothetical protein; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs.
  
     0.488
ACPL_3002
Hypothetical protein.
  
     0.483
ACPL_6647
Methylenetetrahydrofolate-tRNA-(uracil-5-)- methyltransferase trmFO; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
  
     0.473
abfB-2
Arabinofuranosidase.
  
     0.469
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.