STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3833Putative 17.2 kDa protein in melC2-rnhH intergenic region; Predicted integral membrane protein. (150 aa)    
Predicted Functional Partners:
ACPL_3834
Hypothetical protein.
       0.658
ACPL_3832
Transcriptional regulator.
       0.512
ACPL_2647
ADP-heptose-LPS heptosyltransferase 2; ADP-heptose:LPS heptosyltransferase.
  
    0.435
ACPL_6590
Hypothetical protein.
  
     0.430
ACPL_2651
Glycosyl transferase, group 1; Glycosyltransferase.
  
     0.406
ACPL_2650
Glycosyltransferase.
  
     0.401
ACPL_3694
Lipolytic protein G-D-S-L family; Lysophospholipase L1 and related esterases.
  
     0.401
galE-2
UDP-glucose 4-epimerase; dTDP-D-glucose 4,6-dehydratase.
  
     0.400
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.