STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3845ykkB-like uncharacterized protein; Acetyltransferases, including N-acetylases of ribosomal proteins. (177 aa)    
Predicted Functional Partners:
ACPL_3844
Threonine synthase.
       0.778
ACPL_6189
yoaA-like uncharacterized N-acetyltransferase; Acetyltransferases, including N-acetylases of ribosomal proteins.
 
     0.693
hylP
Hyaluronoglucosaminidase.
       0.651
ACPL_3846
Protein ydcF.
     
 0.570
ACPL_4207
Putative N-acetyltransferase; Acetyltransferases, including N-acetylases of ribosomal proteins.
  
     0.515
ACPL_4575
Putative ribosomal N-acetyltransferase ydaF; Acetyltransferases, including N-acetylases of ribosomal proteins.
  
     0.512
ACPL_3842
Hypothetical protein.
       0.462
ACPL_2120
Acetyltransferases, including N-acetylases of ribosomal proteins.
  
     0.417
baeN
Thiotemplate mechanism natural product synthetase; Non-ribosomal peptide synthetase modules and related proteins.
 
  
 0.410
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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