STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3867yihS-like uncharacterized sugar isomerase; N-acyl-D-glucosamine 2-epimerase. (399 aa)    
Predicted Functional Partners:
pfkB
Fructokinase; Sugar kinases, ribokinase family.
   
 0.903
ACPL_3869
Mlc-like protein; Transcriptional regulator/sugar kinase.
       0.687
ACPL_3868
Transcriptional regulators.
       0.681
ACPL_3870
Uncharacterized protein; ABC-type sugar transport system, periplasmic component.
 
     0.534
ACPL_3874
Endo-beta-mannanase.
     
 0.497
manB-3
Beta-mannosidase; Beta-galactosidase/beta-glucuronidase.
       0.487
ACPL_3871
ABC-type sugar transport systems, permease components.
  
    0.475
malG
ABC-type sugar transport system, permease component.
     
 0.473
yihR
Aldose 1-epimerase; Galactose mutarotase and related enzymes.
 
  
 0.422
ACPL_3865
Poly(3-hydroxybutyrate) depolymerase.
       0.404
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.