STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3879Beta-mannanase; Belongs to the glycosyl hydrolase 26 family. (332 aa)    
Predicted Functional Partners:
frk2
Fructokinase; Sugar kinases, ribokinase family.
     
  0.800
pfkB
Fructokinase; Sugar kinases, ribokinase family.
     
  0.800
ACPL_3874
Endo-beta-mannanase.
 
   
 0.698
ACPL_5774
Hypothetical protein.
  
     0.615
ACPL_5771
Hypothetical protein.
  
     0.598
lpqC
Poly(3-hydroxybutyrate) depolymerase.
       0.584
pelX
Pectate lyase/Amb allergen; Subtilisin-like serine proteases.
 
     0.568
ACPL_3870
Uncharacterized protein; ABC-type sugar transport system, periplasmic component.
 
     0.510
ACPL_3008
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
   
 0.454
ACPL_2827
Coagulation factor 5/8 type domain protein; Beta-glucanase/Beta-glucan synthetase.
 
   
 0.439
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.