STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_388Predicted integral membrane protein. (254 aa)    
Predicted Functional Partners:
ACPL_5274
Hypothetical protein.
  
     0.746
ACPL_6632
Hypothetical protein.
  
     0.736
ACPL_8044
Regulator of G-protein signaling 12.
 
     0.721
ACPL_8126
Hypothetical protein.
  
     0.697
ACPL_389
Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding.
 
     0.646
ACPL_7221
Hypothetical protein.
  
     0.641
ACPL_1311
Hypothetical protein.
  
     0.634
ACPL_489
Hypothetical protein.
  
     0.616
ACPL_1683
Hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA.
  
     0.590
ACPL_4306
Hypothetical protein.
  
     0.588
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.