STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_389Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding. (207 aa)    
Predicted Functional Partners:
ACPL_388
Predicted integral membrane protein.
 
     0.648
ACPL_3584
Hypothetical protein.
  
     0.637
ACPL_390
Spore cortex-lytic enzyme; Uncharacterized protein conserved in bacteria.
       0.550
ACPL_1333
Hypothetical protein.
  
     0.519
ACPL_1247
Putative secreted protein.
  
     0.501
ACPL_1464
Hypothetical protein.
  
     0.488
ACPL_179
Uncharacterized protein conserved in bacteria.
  
     0.453
ACPL_1111
Regulatory protein; FOG: TPR repeat.
  
     0.450
ACPL_4501
Hypothetical protein.
  
     0.450
ACPL_1801
Polycystic kidney disease protein 1-like 3; Exoribonuclease R.
  
     0.447
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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