STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3907Hypothetical protein. (137 aa)    
Predicted Functional Partners:
ydcH
Transcriptional regulators.
 
    0.930
ydcH-2
ydcH-like uncharacterized HTH-type transcriptional regulator; Transcriptional regulators.
  
    0.632
ACPL_7276
Signal peptidase I; Belongs to the peptidase S26 family.
   
    0.628
ACPL_3908
Hypothetical protein.
       0.486
ACPL_5333
WGR domain protein.
 
    0.420
ACPL_2644
Hypothetical protein.
  
     0.415
ACPL_1141
Hypothetical protein.
  
     0.410
ACPL_3955
Putative NADH-flavin reductase.
  
    0.407
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.