Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACPL_3987Uncharacterized protein; Glycogen debranching enzyme. (868 aa)    
Predicted Functional Partners:
amyA
Alpha amylase catalytic region; Glycosidases.
 
 
 
 0.861
malP
Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 
 0.700
glgB
1,4-alpha-glucan branching enzyme.
 
 
 0.645
glgB-2
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
 0.596
treZ
Maltooligosyltrehalose trehalohydrolase; 1,4-alpha-glucan branching enzyme.
  
 
 0.596
ACPL_7082
Isoamylase N-terminal domain-containing protein; 1,4-alpha-glucan branching enzyme.
  
 
 0.596
ACPL_3986
Membrane protein of uknown function UCP014873; Predicted membrane protein.
       0.536
ACPL_3989
ATP-dependent transcriptional regulator.
       0.507
ACPL_2033
1,4-alpha-glucan-branching enzyme; Glycosidases.
 
 
 
 0.438
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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