STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3989ATP-dependent transcriptional regulator. (869 aa)    
Predicted Functional Partners:
ACPL_3978
Putative integral membrane protein.
 
     0.653
amyA
Alpha amylase catalytic region; Glycosidases.
 
     0.581
ACPL_3984
Integral membrane protein.
 
     0.559
ACPL_3982
Predicted membrane protein.
 
     0.557
ACPL_3986
Membrane protein of uknown function UCP014873; Predicted membrane protein.
 
     0.535
ACPL_3987
Uncharacterized protein; Glycogen debranching enzyme.
       0.512
ACPL_4009
Putative lipid kinase yegS-like protein; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase.
 
     0.501
ACPL_3975
Hypothetical protein.
 
     0.491
ACPL_3992
Predicted membrane protein.
  
     0.467
ACPL_4216
Hypothetical protein.
  
     0.457
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.