STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4003Hypothetical protein. (185 aa)    
Predicted Functional Partners:
ACPL_138
Inosine-5'-monophosphate dehydrogenase; FOG: CBS domain.
   
  
 0.804
ACPL_4157
Hypothetical protein.
  
  
 0.797
varS
Permeases of the major facilitator superfamily.
 
     0.782
ACPL_4154
Hypothetical protein; Nitroreductase.
  
  
 0.707
ACPL_5251
Peptidase M50; Zn-dependent proteases; Belongs to the peptidase M50B family.
   
    0.640
ACPL_7506
ycjY-like uncharacterized protein; Hydrolases of the alpha/beta superfamily.
   
    0.626
ACPL_1513
PfkB domain protein; Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB).
   
    0.592
ACPL_6373
Phosphofructokinase; Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); Belongs to the carbohydrate kinase PfkB family.
   
    0.592
ACPL_7053
Hypothetical protein; Predicted transmembrane transcriptional regulator (anti-sigma factor).
  
     0.576
ACPL_3537
Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family.
  
     0.552
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.