STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gadCGlutamate/gamma-aminobutyrate antiporter; Amino acid transporters. (476 aa)    
Predicted Functional Partners:
ACPL_4018
Beta-Ala-His dipeptidase; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.
 
 
   0.854
ACPL_4019
Putative membrane protein.
       0.791
ACPL_4021
Hypothetical protein.
       0.773
ACPL_4022
Hypothetical protein.
 
     0.751
pepQ
Xaa-Pro aminopeptidase.
 
  
 0.747
ACPL_4023
yhcA-like uncharacterized MFS-type transporter; Permeases of the major facilitator superfamily.
 
     0.715
ACPL_3975
Hypothetical protein.
 
     0.692
ACPL_3974
Hypothetical protein.
 
     0.682
gadB
Glutamate decarboxylase and related PLP-dependent proteins; Belongs to the group II decarboxylase family.
 
  
 0.649
ACPL_4017
Hypothetical protein.
       0.603
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.