STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4022Hypothetical protein. (416 aa)    
Predicted Functional Partners:
gadC
Glutamate/gamma-aminobutyrate antiporter; Amino acid transporters.
 
     0.751
pepQ
Xaa-Pro aminopeptidase.
 
     0.678
ACPL_4023
yhcA-like uncharacterized MFS-type transporter; Permeases of the major facilitator superfamily.
 
     0.650
ACPL_4018
Beta-Ala-His dipeptidase; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.
 
    0.647
ACPL_4019
Putative membrane protein.
       0.582
ACPL_4021
Hypothetical protein.
       0.539
ACPL_4013
Hypothetical protein.
  
     0.438
ACPL_4017
Hypothetical protein.
       0.431
ACPL_3984
Integral membrane protein.
  
     0.426
ACPL_2487
Collagen alpha-4(VI) chain; PPE-repeat proteins.
  
     0.419
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.