STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepQXaa-Pro aminopeptidase. (366 aa)    
Predicted Functional Partners:
ACPL_4023
yhcA-like uncharacterized MFS-type transporter; Permeases of the major facilitator superfamily.
 
     0.826
gadC
Glutamate/gamma-aminobutyrate antiporter; Amino acid transporters.
 
  
 0.747
ACPL_4022
Hypothetical protein.
 
     0.678
aroQ
3-dehydroquinate dehydratase II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.
 
    0.673
porA
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit.
     
 0.560
ACPL_4018
Beta-Ala-His dipeptidase; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.
 
 
 
 0.542
ACPL_4025
C-jun-amino-terminal kinase-interacting protein 3.
       0.501
fbiA
LPPG:FO 2-phospho-L-lactate transferase.
  
  
 0.497
ACPL_1047
Gamma-glutamyl ligase.
  
  
 0.494
efp
Elongation factor EF-P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
  
 
 0.475
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.