STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4043Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (318 aa)    
Predicted Functional Partners:
metR
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.765
ACPL_6214
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.724
ACPL_4042
2-hydroxy-3-oxopropionate reductase; 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases.
 
   
 0.652
ACPL_4041
Endoribonuclease L-PSP; Putative translation initiation inhibitor, yjgF family.
       0.594
ACPL_4044
Amidohydrolase 2; Predicted metal-dependent hydrolase of the TIM-barrel fold.
       0.536
gltB
Glutamate synthase domain 2.
     
 0.475
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.