STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
resBResB protein required for cytochrome c biosynthesis. (535 aa)    
Predicted Functional Partners:
ccsA
ABC-type transport system involved in cytochrome c biogenesis, permease component.
 
  
 0.995
ccdA
Cytochrome c biogenesis protein.
 
  
 0.991
resA
Alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; Thiol-disulfide isomerase and thioredoxins.
 
  
 0.983
ACPL_405
Phosphoglycerate mutase; Fructose-2,6-bisphosphatase.
 
    0.937
hemD
Uroporphyrinogen-III synthase.
 
    0.860
hemL-3
Glutamate-1-semialdehyde aminotransferase.
  
  
 0.856
qcrC
Cytochrome c, mono- and diheme variants.
 
  
 0.825
ACPL_1643
Cytochrome-c oxidase; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
     0.729
qcrA
Putative menaquinol-cytochrome c reductase iron-sulfur subunit; Rieske Fe-S protein.
  
  
 0.692
qcrB
Cytochrome b subunit of the bc complex.
  
   
 0.656
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.