Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACPL_4085Lipoprotein-releasing system ATP-binding protein; ABC-type spermidine/putrescine transport systems, ATPase components. (229 aa)    
Predicted Functional Partners:
ACPL_4084
Hypothetical protein.
 
 0.958
macB
Macrolide export ATP-binding/permease protein macB; ABC-type antimicrobial peptide transport system, permease component.
 
 
 0.958
salY
Macrolide export ATP-binding/permease protein macB; ABC-type antimicrobial peptide transport system, permease component.
 
 0.935
ACPL_2325
Macrolide export ATP-binding/permease protein macB; ABC-type antimicrobial peptide transport system, permease component.
 
 0.927
ACPL_2928
Macrolide export ATP-binding/permease protein macB; ABC-type antimicrobial peptide transport system, permease component.
 
 0.908
ACPL_4196
Macrolide export ATP-binding/permease protein macB; ABC-type antimicrobial peptide transport system, permease component.
 
 0.726
ACPL_5143
Macrolide export ATP-binding/permease protein macB 1; ABC-type antimicrobial peptide transport system, permease component.
 
 0.720
cydCD
Multidrug resistance protein 2; ABC-type multidrug transport system, ATPase and permease components.
     
  0.685
ACPL_3577
Macrolide export ATP-binding/permease protein macB; ABC-type antimicrobial peptide transport system, permease component.
  
 0.642
ACPL_2574
Protein of unknown function DUF214; ABC-type antimicrobial peptide transport system, permease component.
  
 0.640
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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