STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4103Hypothetical protein. (221 aa)    
Predicted Functional Partners:
ACPL_430
Leucine rich repeat variant; Predicted NTPase (NACHT family).
  
     0.612
ACPL_7758
Mini-circle putative transposase for IS117.
  
     0.569
ACPL_1396
Hypothetical protein.
  
     0.549
ACPL_8300
Hypothetical protein.
  
     0.549
ACPL_8035
Transmembrane and TPR repeat-containing protein 4; FOG: TPR repeat.
  
     0.527
ACPL_6765
Hypothetical protein; Predicted NTPase (NACHT family).
  
     0.512
ACPL_5641
Putative lipopolysaccharide biosynthesis protein; Lipid A core - O-antigen ligase and related enzymes.
  
     0.499
ACPL_1364
Collagen alpha-4(VI) chain; Superfamily II DNA and RNA helicases.
 
  
 0.473
ACPL_720
Protein Daple; Type V secretory pathway, adhesin AidA.
  
     0.467
ACPL_827
Collagen alpha-4(VI) chain; Serine/threonine protein kinase.
  
     0.465
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.