STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4105Hypothetical protein; Multidrug resistance efflux pump. (257 aa)    
Predicted Functional Partners:
ACPL_4106
Endo-1,3(4)-beta-glucanase; Predicted glycosyl hydrolase.
       0.791
barA
Sensory box histidine kinase/response regulator; Signal transduction histidine kinase.
  
  
 0.585
ACPL_4809
Two-component system sensor protein; Signal transduction histidine kinase.
  
  
 0.582
ACPL_2325
Macrolide export ATP-binding/permease protein macB; ABC-type antimicrobial peptide transport system, permease component.
  
  
 0.578
ACPL_2487
Collagen alpha-4(VI) chain; PPE-repeat proteins.
  
  
 0.578
ACPL_2488
Hypothetical protein.
  
  
 0.578
ACPL_2928
Macrolide export ATP-binding/permease protein macB; ABC-type antimicrobial peptide transport system, permease component.
  
  
 0.578
macB
Macrolide export ATP-binding/permease protein macB; ABC-type antimicrobial peptide transport system, permease component.
  
  
 0.578
ACPL_4196
Macrolide export ATP-binding/permease protein macB; ABC-type antimicrobial peptide transport system, permease component.
  
  
 0.578
salY
Macrolide export ATP-binding/permease protein macB; ABC-type antimicrobial peptide transport system, permease component.
  
  
 0.578
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.