STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4112Lacticin 481/lactococcin biosynthesis protein lcnDR2; Lantibiotic modifying enzyme. (870 aa)    
Predicted Functional Partners:
ACPL_4114
Transcriptional regulator, LuxR family; Predicted ATPase.
 
     0.896
ACPL_4113
Hypothetical protein.
       0.636
tycC
Non-ribosomal peptide synthetase modules and related proteins.
 
     0.574
ACPL_2023
Camphene synthase; Similar to chloroplast protein.
  
   
 0.557
ACPL_5972
Hypothetical protein; Predicted NTPase (NACHT family).
  
     0.545
ACPL_2024
SAM-dependent methyltransferases.
  
     0.529
ACPL_4111
Clavaminate synthase-like protein; Probable taurine catabolism dioxygenase.
       0.515
ACPL_5714
Multidrug resistance protein mdtH; Permeases of the major facilitator superfamily.
  
     0.478
ACPL_2157
ydeE-like uncharacterized MFS-type transporter; Sugar phosphate permease.
  
     0.476
ACPL_7233
Integrin alpha-8; Rhs family protein.
  
     0.472
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.