STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4114Transcriptional regulator, LuxR family; Predicted ATPase. (961 aa)    
Predicted Functional Partners:
ACPL_4112
Lacticin 481/lactococcin biosynthesis protein lcnDR2; Lantibiotic modifying enzyme.
 
     0.896
ACPL_2318
Signal transduction histidine kinase.
  
 
 0.783
barA
Sensory box histidine kinase/response regulator; Signal transduction histidine kinase.
   
 
 0.783
ACPL_4809
Two-component system sensor protein; Signal transduction histidine kinase.
   
 
 0.724
ACPL_2274
Two-component system, cell cycle sensor kinase and response regulator; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
 
 0.710
ACPL_5972
Hypothetical protein; Predicted NTPase (NACHT family).
  
     0.705
ACPL_4800
Two-component system, cell cycle sensor kinase and response regulator; Signal transduction histidine kinase.
   
 
 0.636
ACPL_995
ATP-dependent transcriptional regulator.
 
 
 0.591
ACPL_4115
Uncharacterized protein conserved in bacteria.
       0.586
phoR
Sensory box histidine kinase PhoR; Signal transduction histidine kinase.
  
 
 0.569
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.