STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_416Hypothetical protein. (448 aa)    
Predicted Functional Partners:
ACPL_814
Hypothetical protein.
  
     0.762
ACPL_225
Hypothetical protein.
 
     0.692
ACPL_912
Hypothetical protein.
  
     0.692
ACPL_2795
Serine/threonine-protein kinase MRCK gamma; Methyl-accepting chemotaxis protein.
  
     0.689
ndhD
NAD(P)H-quinone oxidoreductase chain 4; Similar to chloroplast protein; Membrane protein involved in the export of O-antigen and teichoic acid.
 
    0.664
ACPL_1464
Hypothetical protein.
  
     0.645
ACPL_4872
Hypothetical protein.
  
     0.645
ACPL_469
Hypothetical protein.
  
     0.642
ACPL_1967
Protein of unknown function DUF88.
  
     0.641
ACPL_7466
Hypothetical protein.
 
     0.641
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.