STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4164Hypothetical protein; Fe-S oxidoreductase. (233 aa)    
Predicted Functional Partners:
ACPL_4163
Iron-sulfur cluster binding protein; Uncharacterized conserved protein containing a ferredoxin-like domain.
 
 0.997
ACPL_2316
Iron-sulfur cluster binding protein; Uncharacterized conserved protein containing a ferredoxin-like domain.
 
 0.989
ACPL_4162
Uncharacterized conserved protein containing a ferredoxin-like domain.
 
 0.979
ACPL_2317
Uncharacterized conserved protein containing a ferredoxin-like domain.
 
 0.913
ACPL_4165
5-carboxymethyl-2-hydroxymuconateDelta- isomerase; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).
  
    0.779
ACPL_4166
Lactate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
     
 0.740
lctP
L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
 
  
 0.557
rbsA-2
Ribose transport system ATP-binding protein; ATPase components of various ABC-type transport systems, contain duplicated ATPase.
       0.487
lsrC-2
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
       0.487
ACPL_4169
Monosaccharide-transporting ATPase; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
       0.487
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.