Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lsrC-2Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components. (334 aa)    
Predicted Functional Partners:
rbsA-2
Ribose transport system ATP-binding protein; ATPase components of various ABC-type transport systems, contain duplicated ATPase.
 0.993
ACPL_4170
Autoinducer 2-binding protein lsrB; ABC-type sugar transport system, periplasmic component.
 0.983
ACPL_2453
Ribose transport system ATP-binding protein; ATPase components of various ABC-type transport systems, contain duplicated ATPase.
 0.972
ACPL_4169
Monosaccharide-transporting ATPase; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 
  
 
0.969
ACPL_2454
Autoinducer 2-binding protein lsrB; ABC-type sugar transport system, periplasmic component.
 0.966
rbsC-2
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
  
  
 
0.925
rbsA
Ribose transport system ATP-binding protein; ATPase components of various ABC-type transport systems, contain duplicated ATPase.
 0.870
ACPL_5444
Simple sugar transport system ATP-binding protein; ATPase components of various ABC-type transport systems, contain duplicated ATPase.
 0.866
lsrC
Autoinducer 2 import system permease protein lsrC; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 
  
 
0.862
ACPL_2041
HTH-type transcriptional repressor purR; Transcriptional regulators.
 
 0.861
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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