Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4170Autoinducer 2-binding protein lsrB; ABC-type sugar transport system, periplasmic component. (346 aa)    
Predicted Functional Partners:
ACPL_4169
Monosaccharide-transporting ATPase; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 0.989
lsrC-2
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 0.983
rbsA-2
Ribose transport system ATP-binding protein; ATPase components of various ABC-type transport systems, contain duplicated ATPase.
 
 0.962
rbsC-2
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 
 0.950
lsrC
Autoinducer 2 import system permease protein lsrC; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 
 0.945
ACPL_2454
Autoinducer 2-binding protein lsrB; ABC-type sugar transport system, periplasmic component.
  
  
 
0.923
ACPL_2453
Ribose transport system ATP-binding protein; ATPase components of various ABC-type transport systems, contain duplicated ATPase.
 
 0.920
adh
Threonine dehydrogenase and related Zn-dependent dehydrogenases.
  
    0.754
ACPL_2318
Signal transduction histidine kinase.
   
 
 0.749
ACPL_4171
Fatty acid metabolism regulator protein; Transcriptional regulators.
       0.746
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.