Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACPL_4172Hypothetical protein; Zn-dependent hydrolases, including glyoxylases. (257 aa)    
Predicted Functional Partners:
adh
Threonine dehydrogenase and related Zn-dependent dehydrogenases.
  
    0.777
ACPL_4171
Fatty acid metabolism regulator protein; Transcriptional regulators.
       0.773
ACPL_4170
Autoinducer 2-binding protein lsrB; ABC-type sugar transport system, periplasmic component.
       0.746
ACPL_5867
GCN5-related N-acetyltransferase; Histone acetyltransferase HPA2 and related acetyltransferases.
  
     0.574
rbsA-2
Ribose transport system ATP-binding protein; ATPase components of various ABC-type transport systems, contain duplicated ATPase.
       0.547
lsrC-2
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
       0.547
ACPL_4169
Monosaccharide-transporting ATPase; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
       0.547
ACPL_770
Hypothetical protein.
  
 
   0.539
ACPL_4174
Transcriptional regulators.
       0.528
repSA
Replication initiator protein.
 
     0.518
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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