STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4174Transcriptional regulators. (250 aa)    
Predicted Functional Partners:
ACPL_5679
Transcriptional regulators.
  
     0.750
ACPL_2738
Transcriptional regulators.
 
  
 0.682
yvoA
Mannosyl-D-glycerate transport/metabolism system repressor mngR; Transcriptional regulators.
  
    0.605
adh
Threonine dehydrogenase and related Zn-dependent dehydrogenases.
 
   
 0.599
ACPL_4171
Fatty acid metabolism regulator protein; Transcriptional regulators.
 
    
0.555
ACPL_4175
Short chain dehydrogenase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
  
 0.543
allR
HTH-type transcriptional repressor allR; Transcriptional regulator.
  
  
 0.528
ACPL_4172
Hypothetical protein; Zn-dependent hydrolases, including glyoxylases.
  
    0.528
ACPL_4170
Autoinducer 2-binding protein lsrB; ABC-type sugar transport system, periplasmic component.
       0.512
ACPL_5261
Transcriptional regulators.
  
    0.511
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.