STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4186Hypothetical protein; Zn-dependent hydrolases, including glyoxylases. (257 aa)    
Predicted Functional Partners:
dgoR
Fatty acid metabolism regulator protein; Transcriptional regulators.
  
    0.773
ACPL_4187
Short chain dehydrogenase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
 
   0.625
ACPL_5867
GCN5-related N-acetyltransferase; Histone acetyltransferase HPA2 and related acetyltransferases.
  
     0.546
ACPL_464
Cortactin-binding protein 2; Type V secretory pathway, adhesin AidA.
  
     0.534
repSA
Replication initiator protein.
 
   
 0.520
ACPL_770
Hypothetical protein.
  
   0.499
baeN
Thiotemplate mechanism natural product synthetase; Non-ribosomal peptide synthetase modules and related proteins.
   
 
 0.489
ACPL_1258
Uncharacterized protein; Permeases of the major facilitator superfamily.
 
     0.481
ACPL_326
Undecaprenyl-diphosphatase; Membrane-associated phospholipid phosphatase.
  
    0.454
ACPL_225
Hypothetical protein.
  
     0.444
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.