STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4189Fatty acid metabolism regulator protein; Transcriptional regulators. (235 aa)    
Predicted Functional Partners:
ACPL_5679
Transcriptional regulators.
  
     0.754
ACPL_2738
Transcriptional regulators.
 
  
 0.646
yvoA
Mannosyl-D-glycerate transport/metabolism system repressor mngR; Transcriptional regulators.
  
    0.575
ACPL_4188
Integral membrane protein.
       0.543
allR
HTH-type transcriptional repressor allR; Transcriptional regulator.
  
  
 0.525
nadR
Transcriptional regulator nadR; FAD synthase.
   
    0.485
ACPL_5261
Transcriptional regulators.
  
    0.473
ACPL_654
HTH-type transcriptional repressor yvoA; Transcriptional regulators.
  
    0.453
kdgR
Pectin degradation repressor protein kdgR; Transcriptional regulator.
  
  
 0.435
ACPL_7348
HTH-type transcriptional repressor allR; Transcriptional regulator.
  
  
 0.434
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.