STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4190Transcriptional regulator, LuxR family; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). (344 aa)    
Predicted Functional Partners:
ACPL_4191
Signal transduction histidine kinase.
   
   0.783
ACPL_4192
Putative transcriptional regulator ycf27; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
       0.773
ACPL_4243
Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.559
baeN
Thiotemplate mechanism natural product synthetase; Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.548
ACPL_3831
Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.540
ACPL_4193
Hypothetical protein.
       0.540
ACPL_4194
Peptidoglycan-binding domain 1 protein.
       0.540
ACPL_4195
ABC-type sugar transport systems, ATPase components.
       0.540
ACPL_4196
Macrolide export ATP-binding/permease protein macB; ABC-type antimicrobial peptide transport system, permease component.
       0.540
ACPL_2184
Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.497
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.