STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4196Macrolide export ATP-binding/permease protein macB; ABC-type antimicrobial peptide transport system, permease component. (401 aa)    
Predicted Functional Partners:
ACPL_4195
ABC-type sugar transport systems, ATPase components.
 
 0.966
ACPL_4194
Peptidoglycan-binding domain 1 protein.
 
     0.942
ACPL_2322
Multidrug resistance protein mdtA; Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.872
ACPL_5131
Methionine import ATP-binding protein metN; ABC-type sugar transport systems, ATPase components.
 
 0.870
ACPL_2323
Membrane-fusion protein.
 
 0.867
ttgG
Toluene efflux pump periplasmic linker protein ttgG; Membrane-fusion protein.
 
 0.866
ACPL_2324
Methionine import ATP-binding protein metN; ABC-type sugar transport systems, ATPase components.
 
 0.862
ACPL_2929
ABC-type oligopeptide transport system, ATPase component.
 
 0.860
ACPL_2933
Putative macrolide-specific efflux protein macA; Membrane-fusion protein.
 
 0.845
ACPL_4193
Hypothetical protein.
       0.790
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.