STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4253Hypothetical protein. (135 aa)    
Predicted Functional Partners:
ACPL_4254
4-oxalocrotonate tautomerase.
 
     0.932
ACPL_4252
Short-chain dehydrogenase/reductase SDR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
   0.828
ACPL_311
yxaF-like uncharacterized HTH-type transcriptional regulator; Transcriptional regulator.
  
     0.604
ACPL_5909
yxaF-like uncharacterized HTH-type transcriptional regulator; Transcriptional regulator.
  
     0.589
metR
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.536
ACPL_1906
Cu/Zn superoxide dismutase.
  
 
 0.520
ACPL_313
Uncharacterized protein conserved in bacteria.
 
     0.509
ACPL_5911
Uncharacterized protein conserved in bacteria.
 
     0.494
katE
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 
 0.480
sdhB
Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit.
   
 
 0.423
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.