STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gphPredicted phosphatases. (205 aa)    
Predicted Functional Partners:
ACPL_4293
Hypothetical protein.
       0.686
ACPL_4291
dTDP-4-dehydrorhamnose reductase.
       0.605
dapA-2
Dihydrodipicolinate synthase/N-acetylneuraminate lyase; Belongs to the DapA family.
  
    0.534
moaA
Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
  
    0.488
ACPL_5350
Predicted phosphatase/phosphohexomutase.
 
  
 0.430
ACPL_3013
HAD-superfamily hydrolase, subfamily IA, variant 1; Predicted phosphatases.
  
     0.409
hisC-2
Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase.
 
  
 0.406
rpe
Pentose-5-phosphate-3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
  
 0.402
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.