Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACPL_4300DNA-directed RNA polymerase specialized sigma subunit; Belongs to the sigma-70 factor family. (289 aa)    
Predicted Functional Partners:
flgC
Flagellar basal body rod protein.
 
 
 0.906
fliM
Flagellar motor switch protein.
 
 
 0.891
flgK
Flagellar hook-associated protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.890
ACPL_7903
Flagellar basal-body rod protein flgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.886
ACPL_7924
Chemotaxis protein motA; Flagellar motor component.
 
  
 0.879
ACPL_7900
Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
  
 0.876
ACPL_7920
Flagellar motor switch/type III secretory pathway protein.
 
  
 0.874
flgE
Flagellar hook protein FlgE.
 
  
 0.874
fliF
Flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.865
fliG
Flagellar motor switch protein.
 
  
 0.859
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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