Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4385MoxR-like ATPases. (320 aa)    
Predicted Functional Partners:
ACPL_4384
Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
 
  
 0.957
ACPL_4386
Hypothetical protein.
 
     0.905
ACPL_4387
Hypothetical protein.
       0.874
ACPL_4388
Hypothetical protein.
       0.874
ACPL_6949
Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
 
  
 0.563
ACPL_2229
Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
 
  
 0.473
ACPL_4389
Hypothetical protein.
       0.472
ACPL_2881
Collagen alpha-5(VI) chain; Translation initiation factor 2 (IF-2; GTPase).
    
  0.468
ACPL_4383
Uncharacterized membrane protein.
 
    0.463
ACPL_4390
Putative DNA-binding protein; Predicted transcriptional regulators.
       0.447
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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