STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4386Hypothetical protein. (424 aa)    
Predicted Functional Partners:
ACPL_4384
Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
 
  
 0.981
ACPL_4387
Hypothetical protein.
 
     0.964
ACPL_4385
MoxR-like ATPases.
 
     0.932
ACPL_4388
Hypothetical protein.
       0.909
ACPL_4383
Uncharacterized membrane protein.
 
    0.784
ACPL_4382
RDD domain-containing protein; Predicted membrane protein/domain.
 
    0.778
ACPL_4389
Hypothetical protein.
       0.472
mtrB
Two-component system, OmpR family, sensor histidine kinase MtrB; Signal transduction histidine kinase.
 
     0.456
ACPL_4390
Putative DNA-binding protein; Predicted transcriptional regulators.
       0.447
ACPL_1066
Transcriptional regulatory protein yycF; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
       0.412
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.