Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4396Hypothetical protein; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases. (150 aa)    
Predicted Functional Partners:
ACPL_4395
Integral membrane protein.
       0.682
ACPL_6091
Integral membrane protein.
  
     0.586
ACPL_6765
Hypothetical protein; Predicted NTPase (NACHT family).
 
    0.549
bga7-2
Beta-galactosidase; Belongs to the glycosyl hydrolase 35 family.
  
 
   0.524
ACPL_2688
Polycystic kidney disease protein 1-like 3.
  
     0.494
ACPL_1110
Regulatory protein; Predicted transcriptional regulators.
  
     0.493
ACPL_5647
Hypothetical protein.
 
 
 0.489
ACPL_4394
Metallothiol transferase fosB; Lactoylglutathione lyase and related lyases.
  
    0.465
ACPL_3635
Protein essC; DNA segregation ATPase FtsK/SpoIIIE and related proteins.
 
     0.446
ACPL_1260
GTP pyrophosphokinase; Guanosine polyphosphate pyrophosphohydrolases/synthetases.
 
    0.420
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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