STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4408Hypothetical protein. (207 aa)    
Predicted Functional Partners:
hexB
Beta-hexosaminidase subunit beta; Predicted ATPase.
  
     0.532
ACPL_2412
Hypothetical protein; 2'-5' RNA ligase.
  
   
 0.529
ACPL_4440
Hypothetical protein; Trans-aconitate methyltransferase.
  
     0.475
ACPL_6383
Hypothetical protein.
  
     0.455
ACPL_633
Hypothetical protein.
  
     0.454
ACPL_4409
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
       0.444
ACPL_8167
Hypothetical protein.
  
     0.439
ACPL_1145
Superfamily I DNA and RNA helicases and helicase subunits.
  
     0.438
ACPL_3166
Hypothetical protein; Methylase involved in ubiquinone/menaquinone biosynthesis.
  
     0.434
ACPL_5780
Hypothetical protein.
  
     0.433
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.