Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| aroC | pabB | ACPL_6485 | ACPL_4410 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Anthranilate/para-aminobenzoate synthases component I. | 0.941 |
| aroC | pabC | ACPL_6485 | ACPL_7954 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 4-amino-4-deoxychorismate lyase; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase. | 0.417 |
| aroC | trpA | ACPL_6485 | ACPL_1808 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.844 |
| aroC | trpB | ACPL_6485 | ACPL_1807 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.669 |
| aroC | trpB-2 | ACPL_6485 | ACPL_3021 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.677 |
| aroC | trpC | ACPL_6485 | ACPL_1806 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.806 |
| aroC | trpD | ACPL_6485 | ACPL_1645 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.837 |
| aroC | trpG | ACPL_6485 | ACPL_167 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Anthranilate/para-aminobenzoate synthases component II. | 0.912 |
| nrps1A | nrps1B | ACPL_1013 | ACPL_1014 | Amino acid adenylation domain-containing protein; Non-ribosomal peptide synthetase modules and related proteins. | Non-ribosomal peptide synthetase modules and related proteins. | 0.999 |
| nrps1A | pabB | ACPL_1013 | ACPL_4410 | Amino acid adenylation domain-containing protein; Non-ribosomal peptide synthetase modules and related proteins. | Anthranilate/para-aminobenzoate synthases component I. | 0.936 |
| nrps1A | pabC | ACPL_1013 | ACPL_7954 | Amino acid adenylation domain-containing protein; Non-ribosomal peptide synthetase modules and related proteins. | 4-amino-4-deoxychorismate lyase; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase. | 0.472 |
| nrps1A | trpA | ACPL_1013 | ACPL_1808 | Amino acid adenylation domain-containing protein; Non-ribosomal peptide synthetase modules and related proteins. | Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.469 |
| nrps1A | trpD | ACPL_1013 | ACPL_1645 | Amino acid adenylation domain-containing protein; Non-ribosomal peptide synthetase modules and related proteins. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.545 |
| nrps1A | trpG | ACPL_1013 | ACPL_167 | Amino acid adenylation domain-containing protein; Non-ribosomal peptide synthetase modules and related proteins. | Anthranilate/para-aminobenzoate synthases component II. | 0.519 |
| nrps1B | nrps1A | ACPL_1014 | ACPL_1013 | Non-ribosomal peptide synthetase modules and related proteins. | Amino acid adenylation domain-containing protein; Non-ribosomal peptide synthetase modules and related proteins. | 0.999 |
| nrps1B | pabB | ACPL_1014 | ACPL_4410 | Non-ribosomal peptide synthetase modules and related proteins. | Anthranilate/para-aminobenzoate synthases component I. | 0.936 |
| nrps1B | pabC | ACPL_1014 | ACPL_7954 | Non-ribosomal peptide synthetase modules and related proteins. | 4-amino-4-deoxychorismate lyase; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase. | 0.472 |
| nrps1B | trpA | ACPL_1014 | ACPL_1808 | Non-ribosomal peptide synthetase modules and related proteins. | Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.469 |
| nrps1B | trpD | ACPL_1014 | ACPL_1645 | Non-ribosomal peptide synthetase modules and related proteins. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.545 |
| nrps1B | trpG | ACPL_1014 | ACPL_167 | Non-ribosomal peptide synthetase modules and related proteins. | Anthranilate/para-aminobenzoate synthases component II. | 0.519 |
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