STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4417Predicted transcriptional regulators. (191 aa)    
Predicted Functional Partners:
ACPL_4416
Methylase involved in ubiquinone/menaquinone biosynthesis.
 
     0.822
baeN
Thiotemplate mechanism natural product synthetase; Non-ribosomal peptide synthetase modules and related proteins.
     
 0.593
nrps1A
Amino acid adenylation domain-containing protein; Non-ribosomal peptide synthetase modules and related proteins.
     
 0.550
nrps1B
Non-ribosomal peptide synthetase modules and related proteins.
     
 0.550
ACPL_654
HTH-type transcriptional repressor yvoA; Transcriptional regulators.
 
  
 0.550
ACPL_6818
Fatty acid metabolism regulator protein; Transcriptional regulator.
  
  
 0.539
ACPL_5514
ydcN-like uncharacterized HTH-type transcriptional regulator; Predicted transcriptional regulators.
 
 
0.489
yvoA
Mannosyl-D-glycerate transport/metabolism system repressor mngR; Transcriptional regulators.
  
  
 0.481
ACPL_5261
Transcriptional regulators.
  
  
 0.481
ACPL_7268
Putative transcriptional regulator of 2-aminoethylphosphonate degradation operons; Transcriptional regulators.
  
  
 0.481
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.