STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ubiEUbiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). (274 aa)    
Predicted Functional Partners:
ACPL_2004
Prestalk A differentiation protein A; Predicted nucleoside-diphosphate-sugar epimerases.
     
  0.900
ytfG
Prestalk A differentiation protein A; Predicted nucleoside-diphosphate-sugar epimerases.
     
  0.900
ACPL_3690
NmrA family protein; Predicted nucleoside-diphosphate-sugar epimerases.
     
  0.900
wrbA
Trp repressor binding protein; Multimeric flavodoxin WrbA; Belongs to the WrbA family.
     
  0.900
ACPL_459
Trans-hexaprenyltranstransferase; Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
 
  
 0.716
gcp
O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
  
 0.540
ubiD
3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases; Belongs to the UbiD family.
  
 0.539
recO
DNA repair protein recO; Involved in DNA repair and RecF pathway recombination.
      
 0.521
cydA
Cytochrome bd-type quinol oxidase, subunit 1.
 
     0.492
ACPL_444
Geranylgeranyl reductase; Dehydrogenases (flavoproteins).
     
 0.481
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.