STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4423Hypothetical protein. (113 aa)    
Predicted Functional Partners:
ACPL_4424
Hypothetical protein.
 
     0.840
ACPL_1448
ADAM 12 protein.
  
     0.625
ACPL_1085
DNA segregation ATPase FtsK/SpoIIIE and related proteins.
  
     0.595
ACPL_6931
Uncharacterized protein conserved in bacteria.
  
     0.580
ACPL_1580
Hypothetical protein; ATPases involved in chromosome partitioning.
  
    0.556
triO
Triple functional domain protein; Type V secretory pathway, adhesin AidA.
  
     0.502
ACPL_7507
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); Belongs to the anti-sigma-factor antagonist family.
  
     0.493
hstK
Serine/threonine protein kinase; Predicted ATPase.
  
 
 
 0.463
ACPL_1627
Aggrecan core protein; PPE-repeat proteins.
  
     0.458
ACPL_1364
Collagen alpha-4(VI) chain; Superfamily II DNA and RNA helicases.
  
     0.454
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.