STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
efeUFerrous iron permease efeU; High-affinity Fe2+/Pb2+ permease. (281 aa)    
Predicted Functional Partners:
efeO
ycdO-like uncharacterized protein; Predicted periplasmic lipoprotein involved in iron transport.
  
 0.999
efeB
Peroxidase ycdB; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
 
  
 0.971
ycdB
Predicted iron-dependent peroxidase.
 
  
 0.910
ACPL_2628
Dyp-type peroxidase family protein; Predicted iron-dependent peroxidase.
  
  
 0.668
ACPL_426
Iron complex transport system ATP-binding protein; ABC-type sugar transport systems, ATPase components.
   
  
 0.651
fepC
Iron complex transport system ATP-binding protein; ABC-type oligopeptide transport system, ATPase component.
   
  
 0.651
ACPL_3062
Vitamin B12-binding protein; ABC-type Fe3+-hydroxamate transport system, periplasmic component.
   
  
 0.580
ACPL_424
Vitamin B12-binding protein; ABC-type Fe3+-hydroxamate transport system, periplasmic component.
   
  
 0.580
sidF
Fe(3+)-citrate-binding protein yfmC; ABC-type Fe3+-citrate transport system, periplasmic component.
   
  
 0.580
ACPL_4426
Enterobactin exporter entS; Permeases of the major facilitator superfamily.
     
 0.543
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.