Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
efeUFerrous iron permease efeU; High-affinity Fe2+/Pb2+ permease. (281 aa)    
Predicted Functional Partners:
efeO
ycdO-like uncharacterized protein; Predicted periplasmic lipoprotein involved in iron transport.
 
 0.999
efeB
Peroxidase ycdB; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
 
 
 0.955
ycdB
Predicted iron-dependent peroxidase.
 
 
 0.864
met
Hepatocyte growth factor receptor; FOG: Ankyrin repeat.
     
 0.559
ACPL_1701
Fibrocystin-L; FOG: Ankyrin repeat.
     
 0.559
ACPL_4147
Hypothetical protein.
     
 0.559
met-2
Hepatocyte growth factor receptor; FOG: Ankyrin repeat.
     
 0.559
ACPL_5841
Filamin-C.
     
 0.559
ACPL_6705
Hypothetical protein.
     
 0.559
met-3
Hepatocyte growth factor receptor.
     
 0.559
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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