STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4439Hypothetical protein. (492 aa)    
Predicted Functional Partners:
ACPL_914
Lipopolysaccharide biosynthesis protein; ATPases involved in chromosome partitioning.
  
 
 0.964
ACPL_3099
Undecaprenyl-phosphate galactose phosphotransferase; Sugar transferases involved in lipopolysaccharide synthesis.
  
  
 0.849
ACPL_7785
Undecaprenyl-phosphate galactose phosphotransferase; Sugar transferases involved in lipopolysaccharide synthesis.
  
  
 0.849
rfbP
Undecaprenyl-phosphate galactose phosphotransferase; Sugar transferases involved in lipopolysaccharide synthesis.
  
  
 0.849
tagH
ABC transporter ATP-binding protein; ABC-type sugar transport systems, ATPase components.
  
  
 0.691
ACPL_5923
Hypothetical protein.
  
     0.611
ACPL_2248
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); Belongs to the anti-sigma-factor antagonist family.
 
     0.585
ACPL_3122
Bifunctional protein glmU; Acetyltransferase (isoleucine patch superfamily).
  
  
 0.583
rfbA
ABC-type polysaccharide/polyol phosphate export systems, permease component.
  
  
 0.583
pdr1-4
Pleiotropic drug resistance protein 1; ABC-type multidrug transport system, permease component.
  
  
 0.583
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.