Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
ACPL_4460 | ACPL_4461 | Hypothetical protein. | Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.561 |
ACPL_4460 | ACPL_4462 | Hypothetical protein. | Phosphoglycerate mutase 1. | 0.561 |
ACPL_4460 | ACPL_4463 | Hypothetical protein. | Putative ubiquinone biosynthesis protein ubiB; Predicted unusual protein kinase. | 0.468 |
ACPL_4460 | ACPL_4464 | Hypothetical protein. | Methylase involved in ubiquinone/menaquinone biosynthesis. | 0.428 |
ACPL_4461 | ACPL_4460 | Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Hypothetical protein. | 0.561 |
ACPL_4461 | ACPL_4462 | Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Phosphoglycerate mutase 1. | 0.932 |
ACPL_4461 | ACPL_4463 | Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Putative ubiquinone biosynthesis protein ubiB; Predicted unusual protein kinase. | 0.634 |
ACPL_4461 | ACPL_4464 | Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Methylase involved in ubiquinone/menaquinone biosynthesis. | 0.586 |
ACPL_4462 | ACPL_4460 | Phosphoglycerate mutase 1. | Hypothetical protein. | 0.561 |
ACPL_4462 | ACPL_4461 | Phosphoglycerate mutase 1. | Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.932 |
ACPL_4462 | ACPL_4463 | Phosphoglycerate mutase 1. | Putative ubiquinone biosynthesis protein ubiB; Predicted unusual protein kinase. | 0.634 |
ACPL_4462 | ACPL_4464 | Phosphoglycerate mutase 1. | Methylase involved in ubiquinone/menaquinone biosynthesis. | 0.581 |
ACPL_4463 | ACPL_4460 | Putative ubiquinone biosynthesis protein ubiB; Predicted unusual protein kinase. | Hypothetical protein. | 0.468 |
ACPL_4463 | ACPL_4461 | Putative ubiquinone biosynthesis protein ubiB; Predicted unusual protein kinase. | Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.634 |
ACPL_4463 | ACPL_4462 | Putative ubiquinone biosynthesis protein ubiB; Predicted unusual protein kinase. | Phosphoglycerate mutase 1. | 0.634 |
ACPL_4463 | ACPL_4464 | Putative ubiquinone biosynthesis protein ubiB; Predicted unusual protein kinase. | Methylase involved in ubiquinone/menaquinone biosynthesis. | 0.716 |
ACPL_4464 | ACPL_4460 | Methylase involved in ubiquinone/menaquinone biosynthesis. | Hypothetical protein. | 0.428 |
ACPL_4464 | ACPL_4461 | Methylase involved in ubiquinone/menaquinone biosynthesis. | Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.586 |
ACPL_4464 | ACPL_4462 | Methylase involved in ubiquinone/menaquinone biosynthesis. | Phosphoglycerate mutase 1. | 0.581 |
ACPL_4464 | ACPL_4463 | Methylase involved in ubiquinone/menaquinone biosynthesis. | Putative ubiquinone biosynthesis protein ubiB; Predicted unusual protein kinase. | 0.716 |