STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4492Hypothetical protein. (375 aa)    
Predicted Functional Partners:
ank2
Ankyrin-2; FOG: Ankyrin repeat.
 
     0.950
ACPL_4493
Uncharacterized protein; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
     0.843
ACPL_6096
Nucleoporin; PPE-repeat proteins.
  
     0.531
ACPL_6910
Lectin-related protein.
  
     0.522
ACPL_2538
Kinesin light chain; FOG: TPR repeat.
  
     0.503
ACPL_6976
Seed lectin; Tfp pilus assembly protein, tip-associated adhesin PilY1.
  
     0.502
ACPL_6765
Hypothetical protein; Predicted NTPase (NACHT family).
  
     0.467
ACPL_7514
Uncharacterized protein conserved in archaea.
  
     0.459
ACPL_6918
Phosphoglycolate phosphatase 1; Predicted phosphatases.
  
     0.438
ACPL_5037
Uncharacterized protein conserved in bacteria.
 
     0.436
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.