STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phaB-2Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. (270 aa)    
Predicted Functional Partners:
fadH
2,4-dienoyl-CoA reductase (NADPH2); NADH:flavin oxidoreductases, Old Yellow Enzyme family.
 
  
 0.858
ACPL_7090
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.844
fadE-2
Acyl-CoA dehydrogenases.
 
 0.820
fadE-3
Acyl-CoA dehydrogenases.
 
 0.819
ACPL_183
Acyl-CoA dehydrogenases.
 
 0.806
fadE-4
Acyl-CoA dehydrogenases.
 
 0.806
ACPL_7021
Acyl-CoA dehydrogenases.
 
 0.798
ACPL_3158
Acyl-CoA dehydrogenases.
 
 0.794
ACPL_4505
Predicted transcriptional regulators.
       0.786
fadE-5
Acyl-CoA dehydrogenases.
 
 0.786
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.