STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4512RTX toxins and related Ca2+-binding proteins. (629 aa)    
Predicted Functional Partners:
ACPL_4510
Hypothetical protein.
       0.783
ACPL_4511
Hypothetical protein.
       0.783
ACPL_3699
Sensor protein kinase walK; Signal transduction histidine kinase.
  
 
   0.632
ACPL_4988
Hypothetical protein.
  
     0.627
phy
Putative histidine kinase, classic; Osmosensitive K+ channel histidine kinase.
  
 
   0.625
ACPL_2012
Putative histidine kinase, classic; Signal transduction histidine kinase.
  
 
   0.604
ACPL_7919
Flagellar protein FliO/FliZ.
 
     0.601
pclO-2
Protein piccolo; Type V secretory pathway, adhesin AidA.
 
 
   0.581
phy1-6
Putative histidine kinase, classic; Osmosensitive K+ channel histidine kinase.
  
 
   0.558
ACPL_1085
DNA segregation ATPase FtsK/SpoIIIE and related proteins.
  
 
   0.507
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.